Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHNKHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAVAKGLTTIDATCPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYG--TAPD-VVHLVETKADIDALSLLS-DKIFVTNQTTMSKWDVADLMHYIKGKFPKAI--QHQEICMATQVRQEAVALQAKDADLTIVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQLVREVLLFLEQFDAADKTTWK-REHNQDFERILPKTKNKYMAEKRSQRLAHLKNGGS |
4MV5 Chain:A ((13-318)) | MQILLANPRGFCAGVDRAISIVENAL--AIYGAPIYVRHEVVHNRYVVDSLRERGAIFI-----EQISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELA-QRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQLGGGEAIPLEGREENIVFE--VPK---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MV5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174672 for 2543 contacts (-68.7/contact) +
2D Compatibility (PS) -32290 + (NN) -10154 + (LL) 1680
1D Compatibility (HY) -17200 + (ID) 5700
Total energy: -238336.0 ( -93.72 by residue)
QMean score : 0.562
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