Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIEILQNNGITDFTHLSFVELDLSKDEGWKEAMLDCEYVLSVASPVFFGKFKNEEELISPAIEGITRILQAAKEAKVKRVVMTSNFGAIGFS-NADKNSITTEAYWTD-ELAKGL-SAYEKSKLIAEKEAWKFMENETELEFATINPVAIFGPSQSNHVSGSFDLLKNLLNGSMKRVINIPLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVDKMPKKTLPNAAIRAAALFSKHAKEGELMINMNRQISNSKARDVLGWKPISTKEEAVLAAVDSLAKYGLLD |
| 4R1U Chain:A ((30-294)) | ----VCVTGAGGFIASWLVKLLLERGYTVRGTVRNPEDP-KNGHLKELEGARE--RLTLHKVDLLDLQSIQSVVHGCHGVFHTA----------PDEMLEPAVNGTKNVIIASAEAKVRRVVFTSSIGTVYMDPNTSRDVVVDESYWSDLEHCKNTKNWYCYGKTVAEQSAWDIAK-ENQVDLVVVNPVVVLGPLLQPTINASTIHILKYLNGAAKTYVNATQSYVHVKDVALAHLLVYETNSASG-RYIC-CETALHRGEVVEILAKYFPEY--PLPTKC---------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4R1U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175834 for 2059 contacts (-85.4/contact) +
2D Compatibility (PS) -28078 + (NN) -11262 + (LL) 5820
1D Compatibility (HY) -16800 + (ID) 3850
Total energy: -230004.0 ( -111.71 by residue)
QMean score : 0.542
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