Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKKPIVVGVTGGSGSGKTSVTKAICNHFSGHSI-------LMIAQDVYYHDQANISFEDRLKV-----NYDHPLAFDTDLLISHIAALRRYESIEKPIYDYAKYTRKKEVEIQEPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQYLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV
2UVQ Chain:A ((24-234))
---RPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFY---KVLTAEQKAKALKGQYNFDHPDAFDNDLMHRTLKNIVEGKTVEVPTYDFVTHSRLPETTVVYPADVVLFEGILVFYSQEIRDMFHLRLFVDTDSDVRLSRRVLRDVR----DLEQILTQYTTFVKPAFEEFCLPTKKYADVIIPRGVDNMVAINLIVQHIQDILN---
General information:
TITO was launched using:
RESULT:
Template:
2UVQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -95832 for 1457 contacts (-65.8/contact) +
2D Compatibility (PS) -21083 + (NN) -8938 + (LL) 844
1D Compatibility (HY) -20400 + (ID) 3700
Total energy: -149109.0 ( -102.34 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2UVQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2UVQ-query.scw
PDB file :
Tito_Scwrl_2UVQ.pdb
: