Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKGDRILDVTLSKVGGKGLFVSEVEQALSDEAIDFAVHSMKDVPSSLKEGLIIGAIPKRESPLDCFVFNQV---NSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKL-HAENFDAIILAKAGLARMGWLENTTLKLEDIPPEVCLPAVGQGALAIECRESDQQIRDMLTSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEFVQFKGLVGNADGSIILESEQVGANPSEIGNKVAEDLLSEGADTIIKELRNV |
3ECR Chain:B ((22-303)) | --RVIRVGTRKSQLARIQTDSVVATLKASYPGLQFEIIAM-------------KIGEKSLFTKELEHALEKNEVDLVVHSLKDLPTVLPPGFTIGAICKRENPHDAVVFHPKFVGKTLETLPEKSVVGTSSLRRAAQLQRKFPHLEFRSIRGNLNTRLRKLDEQQEFSAIILATAGLQRMGWHNRVGQILH---PEECMYAVGQGALGVEVRAKDQDILDLVGVLHDPETLLRCIAERAFLRHLE--CSVPVAVHTAMKDGQLYLTGGVWSLDGS-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ECR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -102059 for 2014 contacts (-50.7/contact) +
2D Compatibility (PS) -27471 + (NN) -15426 + (LL) 3396
1D Compatibility (HY) -20400 + (ID) 5950
Total energy: -167910.0 ( -83.37 by residue)
QMean score : 0.526
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