Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDGKVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNAITLSDHRDLSFGEAYGVIMKE--LR-LLARSVFVVNAVGEIVYTEVVPEGSDHPNYEAAIEAAKKA
3I43 Chain:A ((4-166))
---VHFQGNPVTVANSIPQAGSKAQTFTLVAKDLSDVTLGQFAGKRKVLNIFPSIDTGVCAASVRKFNQLATEIDNTVVLCISADLPFAQSRFCGAEGLNNVITLSTFRNAEFLQAYGVAIADGPLKGLAARAVVVIDENDNVIFSQLVDEITTEPDYEAALAVLK--
General information:
TITO was launched using:
RESULT:
Template:
3I43.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79990 for 1281 contacts (-62.4/contact) +
2D Compatibility (PS) -17234 + (NN) -2584 + (LL) 588
1D Compatibility (HY) -16000 + (ID) 3750
Total energy: -118970.0 ( -92.87 by residue)
QMean score : 0.632
(partial model without unconserved sides chains):
PDB file :
Tito_3I43.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I43-query.scw
PDB file :
Tito_Scwrl_3I43.pdb
: