Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKILIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIQTH-GALKGSYLAIRRISKCHPFHKGGLDFVPPKKDKNADSEHSCKVHHHH
2IF6 Chain:A ((110-126))
---------------------------QYCSEVVWKVYQNALGM---------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2IF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1213 for 56 contacts (21.7/contact) +
2D Compatibility (PS) -1747 + (NN) 102 + (LL) 4100
1D Compatibility (HY) -1600 + (ID) 200
Total energy: 1868.0 ( 33.36 by residue)
QMean score : 0.143
(partial model without unconserved sides chains):
PDB file :
Tito_2IF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IF6-query.scw
PDB file :
Tito_Scwrl_2IF6.pdb
: