Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSH-THPTADDIYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFSTSNHY-HAICNVCGKIVDFHYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN
2W57 Chain:A ((8-133))
--------------LKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELSTQHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTNHSLYLYGKC----------
General information:
TITO was launched using:
RESULT:
Template:
2W57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63504 for 771 contacts (-82.4/contact) +
2D Compatibility (PS) -13306 + (NN) -2988 + (LL) 1652
1D Compatibility (HY) -9200 + (ID) 1950
Total energy: -89296.0 ( -115.82 by residue)
QMean score : 0.321
(partial model without unconserved sides chains):
PDB file :
Tito_2W57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W57-query.scw
PDB file :
Tito_Scwrl_2W57.pdb
: