Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFTEEFL-RKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKL-NQGDIITVDMVVNYHGALADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLAVVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGWTARTVDGSLSAQYEHTFAITKDGPEILTYQGEND
4A6W Chain:A ((3-254))
-ISIKTPEDIEKMRVAGRLAAEVLEMIEPYVKPGVSTGELDRICNDYIVNEQHAVSACLGYHGYPKSVCISINEVVCHGIPDDAKLLKDGDIVNIDVTVIKDGFHGDTSKMFIVGKPTIMGERLCRITQESLYLALRMVKPGINLREIGAAIQKFVEAEGFSVVREYCGHGIGQGFHEEPQVLHYDSRETNVVLKPGMTFTIEPMVNAGKKEIRTMKDGWTVKTKDRSLSAQYEHTIVVTDNGCEILTLRKDD-
General information:
TITO was launched using:
RESULT:
Template:
4A6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104547 for 2185 contacts (-47.8/contact) +
2D Compatibility (PS) -26893 + (NN) -10593 + (LL) 132
1D Compatibility (HY) -19200 + (ID) 4600
Total energy: -165701.0 ( -75.84 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_4A6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4A6W-query.scw
PDB file :
Tito_Scwrl_4A6W.pdb
: