Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFTQL---EAQLTKKNFLDEQVKDTLEQLKNID
4NJM Chain:A ((18-75))
------------------------------------------------------VKGIREILEKAGHEVVMIEKYKKKEDVIERIKDADGVIVRSDKIDEEIIKAGEKVKII-
General information:
TITO was launched using:
RESULT:
Template:
4NJM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5986 for 270 contacts (-22.2/contact) +
2D Compatibility (PS) -5514 + (NN) 1731 + (LL) 4532
1D Compatibility (HY) -4400 + (ID) 700
Total energy: -10337.0 ( -38.29 by residue)
QMean score : 0.548
(partial model without unconserved sides chains):
PDB file :
Tito_4NJM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NJM-query.scw
PDB file :
Tito_Scwrl_4NJM.pdb
: