Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQF--ETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNVADIVSIAQAIEAAGADGLTMINTL----LGMRIDLKTRKPII--ANGTGGLSGPAIKPVAIRMIH--QVRAVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGT-MNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 1JQX Chain:A ((13-304)) | --------------NPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPAYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-GKPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYF-DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADF------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JQX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158296 for 2327 contacts (-68.0/contact) +
2D Compatibility (PS) -30206 + (NN) -14759 + (LL) 1736
1D Compatibility (HY) -14400 + (ID) 4700
Total energy: -220625.0 ( -94.81 by residue)
QMean score : 0.488
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