Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEVFVDGASAGNPGPSGAGIVLKADGIYEQFAIPLAVMTNHEAEFIAIKLGLEEALKKQATLIRLYSDS----KVAIEAIH---KRHAKNPLFKP--HLDAILEMADSLELFFAEWRNVS------QNKQADQLARQAIKKQKQPGVK
2Z1I Chain:A ((5-140))
VEIFTDGSCLGNPGPGGYGAILRYRGREKTFSAGYERTTNNRMELMAAIVAL-EALKEHCEVI-LSTDSHYVRKGITEWIHNWKKRGWKKADKKPVKNVDLWKRLDAALGRHKIKWEWVKGHAGHPENERCDELARAA----------
General information:
TITO was launched using:
RESULT:
Template:
2Z1I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55266 for 886 contacts (-62.4/contact) +
2D Compatibility (PS) -13027 + (NN) -6196 + (LL) 784
1D Compatibility (HY) -2400 + (ID) 2300
Total energy: -78405.0 ( -88.49 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_2Z1I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z1I-query.scw
PDB file :
Tito_Scwrl_2Z1I.pdb
: