Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRTMMNGKIHRATVTEANLNYVGSITIDSAILEAVDMLPNEKVQIVNNNNGARIETYIIPGEPGSGVICLNGAAARHVQVGDVVIIMSYGMFTDEEAKTHEPKIVVLDEKNHIEMILPEEKAHTTL
2EEO Chain:B ((1-89))
-------------------------VTVDQDLLDAAGILPFEQVDIYDITNGARLTTYALPGERGSGVIGINGAAAHLVKPGDLVILVAYGVFDEEEARNLKPTVVLVDERNRI-------------
General information:
TITO was launched using:
RESULT:
Template:
2EEO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50977 for 553 contacts (-92.2/contact) +
2D Compatibility (PS) -9983 + (NN) -4388 + (LL) 3148
1D Compatibility (HY) -10000 + (ID) 2250
Total energy: -74450.0 ( -134.63 by residue)
QMean score : 0.621
(partial model without unconserved sides chains):
PDB file :
Tito_2EEO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2EEO-query.scw
PDB file :
Tito_Scwrl_2EEO.pdb
: