Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGSRRLFLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRIPLIFAYLVMLFGRISFDIASPTTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVNNFDEGRILRGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPNMRFFTQQFGWIFTKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNRTFPPRTMFARIGGEEFAVLLQNV-GTEQAALIADFFREEVERAKFPYNPASGKVTVSIGVASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE |
3ICL Chain:A ((2-162)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DTVTGLPNRQLFCDRLLQALAAHERDGNPVVLLFLDVDNFKSINDSLGHLVGDRLLRATAERIRTAVRDGDTV-ARIGGDKFTILLNGAKDTLNGALVAQKILDGLAQ-PFVFGAQQIVISVSIGIAVSPADGETMEQLLRNADTAMYHAKSRGKNNYQFFSP--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97868 for 1312 contacts (-74.6/contact) +
2D Compatibility (PS) -17809 + (NN) -10905 + (LL) 20532
1D Compatibility (HY) -11600 + (ID) 2400
Total energy: -120050.0 ( -91.50 by residue)
QMean score : 0.444
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