Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------LLYSL-LANRAFLRLLFFGNLLGA-------IYGYIWYLPQLQMTEPRFWLFV---------PDS-PTA-ILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMN-IFYMVD-QGVLVWGSVVLILTHGFMAVEGIL--YAPFYRFRIGHFMIAAVWVFHNDVIDY-VFGQMPIYMGLEKYLPEIGYATFWLTVLVLWFVYDKTIK-NKHLTLEFPHDE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4RQO Chain:A ((20-476)) | NISVFDLFSIGIGPSSSHTVGPMLAANAFLQLLEQKNLFDKTQRVKVELYGSLALTGKGHGTDKAILNGLENKAPETVDPASMIPRMHEILDSNLLNLAGKKEIPFHEATDFLFLQKELLPKHSNGMRFSAFDGNANLLIEQVYYSIGGGFITTEEDFDKNPPPYPFATATELLKLCKKHHLTIAELML----------------VNEKTWRSTAEIHKGILDIAKVMDDCINNGCKHDGVLPGGLNLKRRAPDLYRKLIFEQSDIMNHLNLYAMAVNEENAAGGRIVTAPTNGAAGIIPAVLKYCQQAHDRMSNEDIYTYFLTAAAIGILYKKGASISGAEVGCQGEVGVASSMAAAGLTAVLGGTIEQVENAAEIAMEHHLGMTCDPVLGLVQIPCIERNAMGAVKAVNATRMALIGDGQHQISLDKVIKTMKQTGMDMQSIYKETSMGGLAVNLPEC |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175437 for 1105 contacts (-158.8/contact) +
2D Compatibility (PS) -18361 + (NN) 2381 + (LL) 1056
1D Compatibility (HY) -2400 + (ID) 2050
Total energy: -194811.0 ( -176.30 by residue)
QMean score : 0.097
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