Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VNILHIEWKTRIKSLVVWAVVVIVILGVFMAFFPSMQSSGMQDLVNTKMNALPQDMMKILHMDSMADLTNIDAYFAYVFQYIFIAACVYAALIGAQALIKEETDGTIEFLYAQPITRSSLVFWKMIGNLLSFVAFWVITFLASVALVLFLKPSGVDGGNLVMELVRVFSSELLVAAVFMSAGFMVSSVLRSAKQASPVALALVFLTYILGIMAGLNDKVDFFKYFSPINYAIPSEIMDKGITGTNALISCGVIVVMVAMTFVLYKKKDLKV |
| 3H00 Chain:A ((1-39)) | ----------------------------------NNYTSLIHSLIEESQNQQEKNEQELLELDKWASLWNWFN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H00.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3622 for 148 contacts (24.5/contact) +
2D Compatibility (PS) -4114 + (NN) -1371 + (LL) 23028
1D Compatibility (HY) -1600 + (ID) 400
Total energy: 19165.0 ( 129.49 by residue)
QMean score : -0.011
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