Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNAKTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYLEEIIHDGDILGVSWGTTMYKIAQKLSPLKA--EIKVVQLKGGVSHSDVNTYAAETLALFGAAYDTAPVS---LPLPVVLDNPLAKQMVEADRHIKNIIELGKKANIAIFTVGTV--RDEALLFRLGYFSDQEKARLKEK-AVGDICSRFFTIDGEIADE-KMDERTIGINLQELKQKETAILVAGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN |
| 4L50 Chain:A ((17-265)) | ---------------------------------------------------------FEGCLEYETQLRRQFSLQHVRVIPGLA----DVGGRLGIGAAHMLMSLLQPQQMLAIGFGEATMNTLQRLSGFISSQQIRLVTLSGGV-----GSY------MTGIGQLNAACSVNIIPAPLRASSADIARTLKNENCVKDVLLAAQAADVAIVGIGAVSQQDDATIIRSGYISQGEQLMIGRKGAVGDILGYFFDAKGDVVTNIKIHNELIGLPLSALKTIPVRVGVAGGENKAEAIAAAMKGGYINALVTDQDTAAAILR----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L50.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140836 for 2045 contacts (-68.9/contact) +
2D Compatibility (PS) -26018 + (NN) -8765 + (LL) 5692
1D Compatibility (HY) -18800 + (ID) 3650
Total energy: -192377.0 ( -94.07 by residue)
QMean score : 0.576
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