Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDMVLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAERALKLLHKNEWKFDLIFLDPPYKKQQLEKLIGTLEKLELVNENGRIICEHDKEAIMPDTIGKFEKIKSVSYGITVLSIFEFQEA
3EGI Chain:A ((26-124))
-----------------------TPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGM-RVIAIDIDPVKIALARNNAEVYGIADKIEFICGDF-----LLLASFLKADVVFLSPPW--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3EGI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47326 for 717 contacts (-66.0/contact) +
2D Compatibility (PS) -9896 + (NN) -3518 + (LL) 6956
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -61284.0 ( -85.47 by residue)
QMean score : 0.554
(partial model without unconserved sides chains):
PDB file :
Tito_3EGI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EGI-query.scw
PDB file :
Tito_Scwrl_3EGI.pdb
: