Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTSIEIKSPEEFQAHINGEELVYVDYWKDNCPNCKMLDLSFAEFKNSEIASKVKVLKVKLEEMGE--NFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEEAVSLNA
2I4A Chain:A ((14-103))
------------QDVLKASGLVLVDFWAEWCGPCKMIGPALGEI-GKEFAGKVTVAKVNIDDNPETPNAY---QVRSIPTLMLVRDGKVIDKKVGALPKSQLKAWV----
General information:
TITO was launched using:
RESULT:
Template:
2I4A.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44749 for 568 contacts (-78.8/contact) +
2D Compatibility (PS) -9113 + (NN) -1755 + (LL) 1412
1D Compatibility (HY) -8800 + (ID) 1500
Total energy: -64505.0 ( -113.57 by residue)
QMean score : 0.742
(partial model without unconserved sides chains):
PDB file :
Tito_2I4A.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2I4A-query.scw
PDB file :
Tito_Scwrl_2I4A.pdb
: