Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYSLFEITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPIRSFQDVEKLTIFKPEI---EVPYVLDTIKLLADDMLD-VPLIGFAGAPFTLASYMIEGGPSKNYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYAEYIRPVIEMIVREVKA------VHPTTPIIMQAVGASHLLEEWETMPLDVVGVDWRETITSARKKV-PTKAIQGNLDPSTLLAPEKCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKQLTNYIHERSEILLKKDDIK
3GVQ Chain:A ((13-364))--ELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQDFFSTCRSPEACCELTLQPLRRFPLDAAIIFSDILVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLR--DPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVEGGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAP-VPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDDFGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHSRLL-------


General information:
TITO was launched using:
RESULT:

Template: 3GVQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -237285 for 3028 contacts (-78.4/contact) +
2D Compatibility (PS) -36224 + (NN) -14941 + (LL) 1068
1D Compatibility (HY) -24800 + (ID) 6500
Total energy: -318682.0 ( -105.25 by residue)
QMean score : 0.531

(partial model without unconserved sides chains):
PDB file : Tito_3GVQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GVQ-query.scw
PDB file : Tito_Scwrl_3GVQ.pdb: