Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKVDSLSKKIDGKLLLDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLDE------PLSKNHQ-----LKQKLFMLQDNLNCWDGYKIPTIKKFYQKTYPLFDGDKFDNLMKQVNLA--KDVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNH-IEESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
| 4P33 Chain:A ((3-230)) | LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFR-RLSVYD--NLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIKRI-IEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVK-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -123272 for 1646 contacts (-74.9/contact) +
2D Compatibility (PS) -22465 + (NN) -2550 + (LL) 6448
1D Compatibility (HY) -13600 + (ID) 3000
Total energy: -158439.0 ( -96.26 by residue)
QMean score : 0.474
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