Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFNTVFMATIISAVIGTLWMAIFANYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVAGIIFLLLSLTPLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLGDLHSKEAILAIVGLLITLILLALNVKGALFIGMIATGIIAFITGELKFTDGIVKLPPMPEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAKQALMADAVATSVGSMFGTTPTSAYIESSAGVATGGRTGLTTLTVAILFMVSAFFAPLVGAVSGISAITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAFGFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH |
| 2AMN Chain:A ((3-16)) | ----KRVWPLVIRTVIAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AMN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2979 for 51 contacts (58.4/contact) +
2D Compatibility (PS) -1512 + (NN) -251 + (LL) 35900
1D Compatibility (HY) -1200 + (ID) 250
Total energy: 35666.0 ( 699.33 by residue)
QMean score : 0.192
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