Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANVVVWSKEGCHYCKDVKDFL----IEQKIV-FQDIDVTDH-----DYLREVLQAKYGICHVPVVEIGNIENGTYQAVTEIGLEHLEKALFEKGEVK
4RQR Chain:A ((16-79))
-GKVVVFIKPTCPYCRRAQEILSQLPIKQGLLEFVDITATNHTNEIQDYLQQLTGAR----TVPRVFIG-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
4RQR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36692 for 295 contacts (-124.4/contact) +
2D Compatibility (PS) -5568 + (NN) 625 + (LL) 2628
1D Compatibility (HY) -6400 + (ID) 1200
Total energy: -46607.0 ( -157.99 by residue)
QMean score : 0.640
(partial model without unconserved sides chains):
PDB file :
Tito_4RQR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RQR-query.scw
PDB file :
Tito_Scwrl_4RQR.pdb
: