Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNASSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKKDANVKDAAVLGQSMQTLKRESDDKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILNRELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTLTDKDLTTIDHKEFLNQIPGYSAEQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFGILKALGTKTSYLVKSIITQVVIISIISILISVGVTLILPSIMPA---AMPFRLSPMTIALY------SGLFFLVALFGALLSLRRIAKVDALDAIRGGDE |
3WFD Chain:B ((392-458)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMTVAMVFITLFLSAAGVLQVWLQRMPADGAAMTFMATQDQLAIFYWLREGAGVVFLIGLVAYLLSF----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39290 for 310 contacts (-126.7/contact) +
2D Compatibility (PS) -5790 + (NN) -1714 + (LL) 22396
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -32548.0 ( -104.99 by residue)
QMean score : 0.243
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