Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MENDSLCGGHILQEGLHVRFARMHIWAVTRYTSNGRMGMRIFDRWWMDFGGG
3CCD Chain:A ((10-20))
-----------APNGLDTRPAA------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3CCD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1806 for 38 contacts (-47.5/contact) +
2D Compatibility (PS) -986 + (NN) 1494 + (LL) 2092
1D Compatibility (HY) 800 + (ID) 200
Total energy: 1394.0 ( 36.68 by residue)
QMean score : 0.116
(partial model without unconserved sides chains):
PDB file :
Tito_3CCD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3CCD-query.scw
PDB file :
Tito_Scwrl_3CCD.pdb
: