Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELEICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALSIVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSYHDDIVN
4ITV Chain:A ((71-155))
---------------------------------------GYDYDTFAADLNTVLETLDLQDAVLVGFSMGT----GEVAR----------------------YVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAAPQEFFDGIVAAVKA----------------
General information:
TITO was launched using:
RESULT:
Template:
4ITV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36653 for 497 contacts (-73.7/contact) +
2D Compatibility (PS) -8688 + (NN) -928 + (LL) 6960
1D Compatibility (HY) -7600 + (ID) 1200
Total energy: -48109.0 ( -96.80 by residue)
QMean score : 0.246
(partial model without unconserved sides chains):
PDB file :
Tito_4ITV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ITV-query.scw
PDB file :
Tito_Scwrl_4ITV.pdb
: