Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MENERKRILELVKQGIISTEEALTLLENISKKEGKTAAKENIRRSAAPREEEQIEEETKEEPSYDYSKGWNNQGNPYTPPKSRKRRPEPTPENHERDEEEGGENSSKDREDSMRNMVNDLSQAGEKIGSFLNSAFKQVKDMPFPFLTSTKIERDFIYHDTTLSILEFEIANGNIEFKPSDSNDIKVHAMIKLFKEYPEDEALKIFFDKTTLRVDEETLRFESKSKQIVTNLTVYLPRREYDYVSVKMLNGNFHMDELSGRDLFVKTTNGNISIGTLNATLAEIESINGNVRIQNGEIRDVALKTFNGNVAVKGNYYSTNLQTKNGNVNYQLTGNEATFLKAKTGAGNIDVVVPATIGVDGRFHTNLGKLLLDLKDAEILESKTESVSKSITFTKLPNAADSSLKIEAEATTGSVKIRDVK |
2F3O Chain:A ((289-313)) | ----------DIGEGRINRELAFDILANLWIKTNE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2471 for 100 contacts (-24.7/contact) +
2D Compatibility (PS) -2676 + (NN) -1271 + (LL) 22428
1D Compatibility (HY) -1600 + (ID) 350
Total energy: 14060.0 ( 140.60 by residue)
QMean score : 0.554
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