Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRYLHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLESELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE
4ELP Chain:A ((224-285))
---------------------------------------------------------------------FRRAGYRLGMHHFRDGDAGNLALVTGAGLLKTSKNLAAATRFLTY---LLSPQAQQYFVGNIGEY---------------
General information:
TITO was launched using:
RESULT:
Template:
4ELP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2097 for 253 contacts (-8.3/contact) +
2D Compatibility (PS) -6517 + (NN) -1772 + (LL) 7064
1D Compatibility (HY) -3200 + (ID) 950
Total energy: -7472.0 ( -29.53 by residue)
QMean score : -0.080
(partial model without unconserved sides chains):
PDB file :
Tito_4ELP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELP-query.scw
PDB file :
Tito_Scwrl_4ELP.pdb
: