Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDGLIKIGHFVLSEKNIWEIR---RQVGMVFQNPDNQFVGATVQDDVAFGLENHGVPHDTMVERVESALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPDVIILDEATSMLDPRGRAEVMETIRIMREQEDITVISITHDLDEVL-FADRVIVMNKGEIHSEGTPKEIFQQADAMREIG--LGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLNSNN
2IT1 Chain:A ((4-259))-----IKLENIVKKFGNFT--ALNNINLKIKDGEFMALLGPSGSGKSTLLYTIAGIYKPTSGKI-----YFDEKDVTELPPKDRNVGLVFQN-WALYPHMTVYKNIAFPLELRKAPREEIDKKVREVAKMLHIDKLLNRYPWQLSGGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEVRAELKRLQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPK-YKFVGGFLGNPPM-----NFVEAKVEDGKLVITEKSKL----------


General information:
TITO was launched using:
RESULT:

Template: 2IT1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -143608 for 1938 contacts (-74.1/contact) +
2D Compatibility (PS) -26876 + (NN) -6179 + (LL) 2032
1D Compatibility (HY) -18400 + (ID) 4450
Total energy: -197481.0 ( -101.90 by residue)
QMean score : 0.461

(partial model without unconserved sides chains):
PDB file : Tito_2IT1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2IT1-query.scw
PDB file : Tito_Scwrl_2IT1.pdb: