Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEVEGVVQETLPNAMFNVELENGHKVLATVSGKIRMHYIRILPGDKVTVELSPYD-LTRGRITYRFK
1JT8 Chain:A ((16-85))
--RKEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKN-RIWVREGDVVIVKPWEVQGDQKCDIIWRYT
General information:
TITO was launched using:
RESULT:
Template:
1JT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26924 for 455 contacts (-59.2/contact) +
2D Compatibility (PS) -7321 + (NN) -456 + (LL) 396
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -38605.0 ( -84.85 by residue)
QMean score : 0.458
(partial model without unconserved sides chains):
PDB file :
Tito_1JT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JT8-query.scw
PDB file :
Tito_Scwrl_1JT8.pdb
: