Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQIIDDVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYHGRVKALAEAARENGLEF
3PIP Chain:L ((26-111))
---------------------------RLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALKSGN---KTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGG---
General information:
TITO was launched using:
RESULT:
Template:
3PIP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13698 for 585 contacts (-23.4/contact) +
2D Compatibility (PS) -9547 + (NN) -5151 + (LL) 2588
1D Compatibility (HY) -4000 + (ID) 2650
Total energy: -32458.0 ( -55.48 by residue)
QMean score : 0.387
(partial model without unconserved sides chains):
PDB file :
Tito_3PIP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3PIP-query.scw
PDB file :
Tito_Scwrl_3PIP.pdb
: