Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNENGVRKFGAED---LRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELL--KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS
3QAO Chain:A ((6-96))
--------------------IKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDD-PLFDKNV-ALDMQRHLLIEKKQRIE-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3QAO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22680 for 489 contacts (-46.4/contact) +
2D Compatibility (PS) -9538 + (NN) -2890 + (LL) 4772
1D Compatibility (HY) -7200 + (ID) 1700
Total energy: -39236.0 ( -80.24 by residue)
QMean score : 0.455
(partial model without unconserved sides chains):
PDB file :
Tito_3QAO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QAO-query.scw
PDB file :
Tito_Scwrl_3QAO.pdb
: