Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKLNEALKKAERIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP----EYMLSHTCLVREPEKFYQFVTENMY-YPNAVPNVIHKKMAEIETEKDV-TIITQNIDGLHEKAGSKKVVNFHGSLYHCYCQNCGMTVTAKDYLK----SDIHT--DCGGVIRPDVVLYEEAISESAIDQSLTAIRKADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKERISLPYPFEMMESDAVKVFEEI
4BUZ Chain:A ((3-199))
MKEFLDLLNESRLTVTLTGAGISTPSGIPDF---------YSQNVFDIDFFYSH------PEEFYRFAKEGIFPMLQAKPNLAHVLLAKLEEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVPLCDDCNSLIRPNIVFFGENLPQDALREAIGLSSRASLMIVLGSSLVVYPAAEL--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4BUZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87002 for 1290 contacts (-67.4/contact) +
2D Compatibility (PS) -19738 + (NN) -10810 + (LL) 4076
1D Compatibility (HY) -18000 + (ID) 3450
Total energy: -134924.0 ( -104.59 by residue)
QMean score : 0.643
(partial model without unconserved sides chains):
PDB file :
Tito_4BUZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BUZ-query.scw
PDB file :
Tito_Scwrl_4BUZ.pdb
: