Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNFNFFVRSGFIGLILLFVIQVLGIIRGLLIQSGFMDGSIDQTLLGTKLIIVPIIFFTISVIFFLLWFYKDYQKSRFPN
2KSR Chain:A ((140-163))
-----------------------------------------------FLWIFVFVCVFGTIGMFLQPLFQN--------
General information:
TITO was launched using:
RESULT:
Template:
2KSR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -10452 for 89 contacts (-117.4/contact) +
2D Compatibility (PS) -2411 + (NN) 419 + (LL) 3944
1D Compatibility (HY) -4000 + (ID) 200
Total energy: -12700.0 ( -142.70 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_2KSR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KSR-query.scw
PDB file :
Tito_Scwrl_2KSR.pdb
: