Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYGEEQQEIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGLLVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTIKYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIPSL |
| 2K48 Chain:A ((36-78)) | ---------------------------------------TLQELQENITAHEQQLVTARQKLKDAEKAVEVDPDDVNKSTLQ------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K48.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1330 for 200 contacts (6.7/contact) +
2D Compatibility (PS) -4804 + (NN) -3151 + (LL) 16128
1D Compatibility (HY) 1600 + (ID) 250
Total energy: 10853.0 ( 54.27 by residue)
QMean score : 0.315
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