Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIGLSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAA----NMDFHEVKKSLIHVLKVGRVLKQKPNNSK
1NZ0 Chain:A ((10-117))
----ERLRLRRDFLLIFKEGKSLQNEYFVVLFRKNGM-DYSRLGIVVKRKFGKATRRNKLKRWVREIFRRNKGVIPKGFDIVVIPRKKLSEEFERVDFWTVREKLLNLLKRIE----------
General information:
TITO was launched using:
RESULT:
Template:
1NZ0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48648 for 711 contacts (-68.4/contact) +
2D Compatibility (PS) -11268 + (NN) -5996 + (LL) 724
1D Compatibility (HY) -8800 + (ID) 1700
Total energy: -75688.0 ( -106.45 by residue)
QMean score : 0.719
(partial model without unconserved sides chains):
PDB file :
Tito_1NZ0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1NZ0-query.scw
PDB file :
Tito_Scwrl_1NZ0.pdb
: