Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKMNKKVLLTSTMAASLLSVASVQAQETDTTWTARTVSEVKADLVKQDNKSSYTVKYGDTLSVISEAMSIDMNVLAKINNIADINLIYPETTLTVTYDQKSHTATSMKIETPATNAAGQTTATVDLKTNQVSVADQKVSLNTISEGMTPEAATTIVSPMKTYSSAPALKSKEVLAQEQAVSQAAANEQVSPAPVKSITSEVPAAKEEVKPTQTSVSQSTTVSPASVAAETPAPVAKVAPVRTVAAPRVASVKVVTPKVETGASPEHVSAPAVPVTTTSPATDSKLQATEVKSVPVAQKAPTATPVAQPASTTNAVAAHPENAGLQPHVAAYKEKVASTYGVNEFSTYRAGDPGDHGKGLAVDFIVGTNQALGNKVAQYSTQNMAANNISYVIWQQKFYSNTNSIYGPANTWNAMPDRGGVTANHYDHVHVSFNK |
3MC8 Chain:A ((217-299)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TEPRVLVSEVLVRP---QSGQLTPELE-TQVYNVIRTQP---GRTTTRSQLQEDINAIFGTGFFSNVQA-SPEDTPLGVRVSFIVQPNPVL--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MC8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6056 for 541 contacts (11.2/contact) +
2D Compatibility (PS) -8321 + (NN) 1675 + (LL) 23736
1D Compatibility (HY) -3600 + (ID) 1150
Total energy: 18396.0 ( 34.00 by residue)
QMean score : 0.303
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