Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYDHLLNLTHY--KDINPNL-DLAIDYLLSHDLRNLDIGTYHISPEVILMVQSNQLSESFDHIFEYHKKYLDIHYVIEGHEVIKLGKGDKVEVEEYLGDIGFIKCSEETSFDLRDNYIAFFFPEEAHQPNGMGSLGNYVKKGVLKVLMA
4QHG Chain:A ((43-82))
-----LTNKTIYINKNILPYLSDEEIRFILAHELLHLKYGKYHINEFEEELLFLFPNKEAILINLINKLHQKK-----------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4QHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7713 for 136 contacts (-56.7/contact) +
2D Compatibility (PS) -4003 + (NN) -2192 + (LL) 6208
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -12600.0 ( -92.65 by residue)
QMean score : -0.014
(partial model without unconserved sides chains):
PDB file :
Tito_4QHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QHG-query.scw
PDB file :
Tito_Scwrl_4QHG.pdb
: