Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPIISIIMGSKSDWGTMQKTAEVLDNFGIAYEKKVVSAHRAPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSNELI
2FW1 Chain:A ((23-143))
---PVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI---
General information:
TITO was launched using:
RESULT:
Template:
2FW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83376 for 1017 contacts (-82.0/contact) +
2D Compatibility (PS) -12977 + (NN) -4768 + (LL) 788
1D Compatibility (HY) -13600 + (ID) 3700
Total energy: -117633.0 ( -115.67 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_2FW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FW1-query.scw
PDB file :
Tito_Scwrl_2FW1.pdb
: