Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MASGEKAKIQRKKSGAWSMTYKTLDGNVVATFRPMFKKTGSHCYISTSKMTKSDGNNNFSIQIYYKGTSNVKIKMFDDNPEHTMQFSKKKFANNMLNRDESTTNHSYDKVLEGDLTPFMGQFSSDSFNQTIVDSGMTYGGYEPKDYYEGRTTVFPAITKTGYWNGITSHGSYVIKNDDLPKKIKNYYEIHVYGANSGAINSTGSLKRIFYLVPPKVEGPDGKVLSKRQVFEVGANNQLISLSYQSPDWWKRYKKSGLEKDLDVDAIYRGDFSSLKGTWRNGKGEVLTIN---DDGSTDDGERISIGSTEKSRLPSVGMSSGNFGVSVYLFQIGVSNPYIENGHTSDTTRPRLAIGLNPGDFPTDAYYYRY |
2C1S Chain:A ((5-34)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CELQGLWRNELGSNMTISALDVAGTFSGSYQTAVTATNKQILVSPLKGAQQPPGTKGQQPTFGFTVQWQFADSTTVFVGQCFVDRRGKEMLEMAWLLRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5738 for 107 contacts (53.6/contact) +
2D Compatibility (PS) -3002 + (NN) -1756 + (LL) 12260
1D Compatibility (HY) -1200 + (ID) 450
Total energy: 11590.0 ( 108.32 by residue)
QMean score : 0.429
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