Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKMTVYFDG------NFWLGLIEYDDDGDYKVFRYFFGKEPKDDDVFNFINHKLNDLIKKYEFVKTDISLKRTNEHKKSPKRMQREINREKRKPVVSTKAQLAMKTIHMSIKNERQLSQKCKKNELRKHRYQLKQEKRYQKKKGH
1D0D Chain:A ((22-49))
--ERAYFRNGKGGCDSFWICPEDHTGADYYSSYRDCFNACI--------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1D0D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6375 for 83 contacts (-76.8/contact) +
2D Compatibility (PS) -2537 + (NN) -1315 + (LL) 8008
1D Compatibility (HY) -400 + (ID) 250
Total energy: -2869.0 ( -34.57 by residue)
QMean score : -0.009
(partial model without unconserved sides chains):
PDB file :
Tito_1D0D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1D0D-query.scw
PDB file :
Tito_Scwrl_1D0D.pdb
: