Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRKRFSLLNFIVVTFIFFFFILFPLLNHKGKVDA-NSRQSVTYTKEEFIQKIVP--DAQDLGKSYG-IRPSFIIAQAALDSDFGEKILANKYHNLFGLLAEPGTPSITLNDSSTGKKQEKQFTHYKSWKYSMYDYLAHIKSGATGKKDSYTIMVSVKNPKTLVQKLQDSGFDNDKKYAKKMTEIIDLYDLTRYDK |
| 3S9Z Chain:A ((117-220)) | --------------------LVVPVLNARFALNAANARWGSLY-DALYGTDVIPETDGAEKGPTYNKVRGDKVIAYARKFLDDSVPLSSGSFGDATGFTVQDGQLVVALPDKSTGLANPGQFAGYTGAAESPTSVLLINHGLHIEILIDPESQVGTTDRAGVKDVILESAITTIMDFEDSVAAVDAADKVLGYRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S9Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -409 for 534 contacts (-0.8/contact) +
2D Compatibility (PS) -10322 + (NN) 2290 + (LL) 2536
1D Compatibility (HY) -4400 + (ID) 1300
Total energy: -11605.0 ( -21.73 by residue)
QMean score : 0.114
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