Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITLEKFIDHLNVEEVLFTFFTKLISILLLIIAFVIVRQVINYLFEKTVNRSLAFSRQKVARQKTLAKLSHNVLNYTLYFFLFYWILSILGVPISSLLAGAGIAGVAIGLGAQGFLSDVVNGFFILLENQFDVGDIINVGTVSGTVTNVGIRTTQIHDFDGTLHFIPNRNITIVSNKSRSNMRAQIDIPLFVHTNLDQISDIVTKINEEYVSKHPAIV-GEPTVFGPTTNANGQFVYRINIFTQN---GAQF-DIYAEFYKLYQKAILEEGIDLPTYNFSNNHSR |
1OPK Chain:A ((90-244)) | ------------------------------------------------------------------------------------WVPSNYITPVNSLEKHSWYHGPVSRNAAEYLLSSGINGSFLVRESESSPGQRSISLRYEGRVYHYRINTAS----DGKLY---------VSSESRFNTLAEL-----VHHHSTVADGLITTLH------YPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1OPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57219 for 900 contacts (-63.6/contact) +
2D Compatibility (PS) -15910 + (NN) -3264 + (LL) 11200
1D Compatibility (HY) -3200 + (ID) 2150
Total energy: -70543.0 ( -78.38 by residue)
QMean score : 0.244
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