Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIRLSKFIKMIVVILFLISVAASFYFFHVAQVRDDKSFISNGQRKPGNSLYAYDKSFDKLLKQKIEMTNQNIKQVAWYVPAAKKTHKTAVVVHGFANSKENMKAYGWLFHKLGYNVLMPDNIAHGESHGQLIGYGWNDRENIIKWTEMIVD-----KNPSSQITLFGVSMGGATVM---------------------------MASGEKLPSQVVNIIEDCGYSSVWDELKFQAKEMYGLPAFPLLYEVSTISKIRAGFSYGQASSVEQLKKNNLPALFIHGDKDNFVP---TSMVYDNYKATAGKKELYIVKGAKHAKSFE-TEPEKYEKRISSFLKKYEK |
4KE9 Chain:A ((42-265)) | -------------------------------------------------------------------------------------------LLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDM------ERTTFHDWVASVEEGYGWLKQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDV-KELAYEKT-----PTASLLQLARLMAQTKA-----------KLDRIVCPALIFVSDEDHVVPPGNADIIFQGISST--EKEIVRLRNSYHVATLDYDQPMIIERSLEFFAKHA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -25340 for 1413 contacts (-17.9/contact) +
2D Compatibility (PS) -19950 + (NN) -5499 + (LL) 9032
1D Compatibility (HY) -12400 + (ID) 2500
Total energy: -56657.0 ( -40.10 by residue)
QMean score : 0.380
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