Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVFAKISQLAHYAPSQIIKNEDLSLIMDTSDDWISSRTGIKQRHIS-KNETTADLANKVAEQLIEKSGYSASQIDFIIVATMTPDSMMPSTAARVQAHIGASNAFAFDLSAACSGFVFALSTAEKLISSGSYQKGLVIGAETVSKVLDWTDRGTAVLFGDGAGGVLLEASKEKHFLAESLNTDGSRQGLQSSQVGLNSPFSDEVLDDK--FLKMDGRAIFDFAIKEVSKSINHLIETSYLEKEDIDYLFLHQANRRILDKMSRKIDIARDKFPENMMDYGNTSAASIPILLSESYENGLLKLDGNQTILLSGFGGGLTWGSLIVKI
2GYO Chain:A ((1-316))-MYTKIIGTGSYLPEQVRTNADLEKMVDTSDEWIVTRTGIRERHIAAPNETVSTMGFEAATRAIEMAGIEKDQIGLIVVATTSATHAFPSAACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLARTCDPTDRGTIIIFGDGAGAAVLAASEEPGIISTHLHADGSYGEL------LTLPNADRVNPENSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRIISATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAVRDGRIK--PGQLVLLEAFGGGFTWGSALVRF


General information:
TITO was launched using:
RESULT:

Template: 2GYO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189638 for 2998 contacts (-63.3/contact) +
2D Compatibility (PS) -32447 + (NN) -7132 + (LL) 512
1D Compatibility (HY) -22800 + (ID) 6100
Total energy: -257605.0 ( -85.93 by residue)
QMean score : 0.467

(partial model without unconserved sides chains):
PDB file : Tito_2GYO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2GYO-query.scw
PDB file : Tito_Scwrl_2GYO.pdb: