Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKYYIVIGYLISMLITVAGVFFGLNHMLIETRGVYYILSVTIIACIVGGIVNLFLLSSVFTSLKKLKQKMKDISQRCFDTKAQICSPQEFKDLETAFNQMSSELESTFKSLNESEREKTMMIAQLSHDIKTPITSIQSTVEGILD--GIISEEEVNYYLNTISRQTNRLNHLVEEL-SFITLETMSDTAEPHKEETIYLDKLLIDILSEF------QLVFEKENRQVMIDVAPDVSKLSSQYDKLSRILLNLISNAVKYSDPGSPLT-IKAYSNRQD--IVIDIIDQGYGIKDEDLASIFNRLYRVESSRNMKTGGHGLGLYIARQLAHQLNGDILVESQYQKGSKFSLVLKLQK
4JAV Chain:A ((7-241))------------------------------------------------------------------------------------------------------SKELER----LKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFES-NVPCPVEAYIDPTRIR-------QVLLNLLNNGVKYSKKDAPDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYEVPGTGLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPKD-


General information:
TITO was launched using:
RESULT:

Template: 4JAV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65313 for 1489 contacts (-43.9/contact) +
2D Compatibility (PS) -23749 + (NN) -6739 + (LL) 10088
1D Compatibility (HY) -17600 + (ID) 3950
Total energy: -107263.0 ( -72.04 by residue)
QMean score : 0.479

(partial model without unconserved sides chains):
PDB file : Tito_4JAV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4JAV-query.scw
PDB file : Tito_Scwrl_4JAV.pdb: