Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDKKTFEENLQELETIVSRLETGDVALEDAIAEFQKGMLISKELQRTLKEAEETLVKVMQADGTEVEMDT
3U0C Chain:A ((114-171))
----QKNLEFSDKINTLLSETEGLTRDYEKQINKLKNADSKIKDLENKINQIQTRLSELDPE---------
General information:
TITO was launched using:
RESULT:
Template:
3U0C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 4762 for 219 contacts (21.7/contact) +
2D Compatibility (PS) -6458 + (NN) -4554 + (LL) 556
1D Compatibility (HY) -400 + (ID) 450
Total energy: -6544.0 ( -29.88 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3U0C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3U0C-query.scw
PDB file :
Tito_Scwrl_3U0C.pdb
: