Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVTIEKIDEAIHRYYKQTHSVVS--PDLIKAILYSVDGGGKRIRPRILLEILEGFGVELIDGHYDVAAALEMIHTGSLIHDDLPAMDNDDFRRGRLTNHKKFDEATAVLAGDSLFLDPFDLVVKAGFKADVTVRLIELLSMSAGSFGMVGGQMLDMKGENKVLSIDDLSLIHINKTGRLLAYPFVAAGILAEKSEEVKGKLHQAGLLIGHAFQVRDDILDVTASFEELGKTPNKDIVAEKTTYPNLLGLDKSQEILDDTLKKAQAIFQNL-EKKANFNARKIIDIIEGLRLNG
3NPK Chain:A ((10-283))----------IHHLEKNLPKVESFHPFFNEALALMLKAGGKHFRAQLLLSVVQSNKPELLNQALDVALALEFIHTYSLIHDDLPAMDNADFRRGIPTLHKSYDETTAILVGDALNTEAFLVLSHAHLKDEIKIKLIKTLAFNAGLNGMVIGQAIDCFFEDKRLSLNELEFLHTHKTARLIAAALKMGCEICELNNEESNQIYKLGLKLGLIFQINDDIIDVT------------------NSFVNLLGLEQAIKTKENLLNECEQDLEKLNEKLAQMIQNLIIQYL-------


General information:
TITO was launched using:
RESULT:

Template: 3NPK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102783 for 2072 contacts (-49.6/contact) +
2D Compatibility (PS) -27937 + (NN) -15398 + (LL) 2384
1D Compatibility (HY) -19600 + (ID) 5100
Total energy: -168434.0 ( -81.29 by residue)
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_3NPK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NPK-query.scw
PDB file : Tito_Scwrl_3NPK.pdb: