Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANKQDLIAKVAEATELTKKDSAAAVDAVFAAVADYLAEGEKVQLIGFGNFEVRERAARKGRNPQTGAEIEIAASKVPAFKAGKALKDAVK
1P78 Chain:A ((2-89))
--NKGELVDAVAEKASVTKKQADAVLTAALETIIEAVSSGDKVTLVGFGSFESRERKAREGRNPKTNEKMEIPATRVPAFSAGKLFREKVA
General information:
TITO was launched using:
RESULT:
Template:
1P78.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3317 for 465 contacts (-7.1/contact) +
2D Compatibility (PS) -9078 + (NN) 918 + (LL) 352
1D Compatibility (HY) -6400 + (ID) 2050
Total energy: -19575.0 ( -42.10 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_1P78.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P78-query.scw
PDB file :
Tito_Scwrl_1P78.pdb
: