Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSEFTFEIVEKLLVLSENEKGWTKELNRVSFNGAPAKFDLRTWSPDHTKMGKGITLSNEEFKVILDAFRK
3EYE Chain:A ((114-138))
--------------------------------------------EGKKQISSKVYVDDQDLTDLRFIKQR
General information:
TITO was launched using:
RESULT:
Template:
3EYE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3909 for 104 contacts (-37.6/contact) +
2D Compatibility (PS) -2792 + (NN) -2253 + (LL) 3320
1D Compatibility (HY) -800 + (ID) 0
Total energy: -6434.0 ( -61.87 by residue)
QMean score : 0.446
(partial model without unconserved sides chains):
PDB file :
Tito_3EYE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EYE-query.scw
PDB file :
Tito_Scwrl_3EYE.pdb
: