Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQFLKSAAILSLAVTAVSTSQPVAGITKDYNNRNEKVKKYLQENNFGHKIAYGWKNKVEFDFRYLLDTAKYLVNKEEFQDPLYNDAREELISFIFPYEKFLINNRDITKLTVNQYEAIVNRMSVALQKFSKNIFEKQKVNKDLIPIAFWIEKSYRTVGTNEIAASVGIQGGFYQNFHDYYNYSYLLNSLWHEGNVKEVVKDYENTIRQILSKKHEIEKILNQSTSDISIDDDDYEKGNKELLREKLNIILNLSKRDYRVTPYYEVNKLHTGLILLEDVPNLKIAKDKLFSLENSLKEYKGEKVNYEELRFNTEPLTSYLENKEKFLVPNIPYKNKLILREEDKYSFEDDEEEFGNELLSYNKLKNEVLPVNITTSTILKPFEQKKIVEDFNPYSNLDNLEIKKIRLNGSQKQKVEQEKTKSPTPQKETVKEQTEQKVSGNTQEVEKKSETVATSQQSSVAQTSVQQPAPVQSVVQESKASQEEINAAHDAISAYKSTVNIANTAGVTTAEMTTLINTQTSNLSDVEKALGNNKVNNGAVNVLREDTARLENMIWNRAYQAIEEFNVARNTYNNQIKTE---TVPVDNDIEAILAGSQAKISHLDNRIGARHMDQAFVASLLEVTEMSKSISSRIKE |
| 2WB1 Chain:D ((92-145)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CYTKIYIEAEALNEPKMLYSKDIKSEDPSIVPISGDIPIVLLGANQKIS-LEARLRLGYGKEHAKFIPVSLAIVRYYPKVEILG |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WB1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2382 for 279 contacts (8.5/contact) +
2D Compatibility (PS) -4895 + (NN) 1986 + (LL) 38260
1D Compatibility (HY) -4800 + (ID) 900
Total energy: 32033.0 ( 114.81 by residue)
QMean score : -0.126
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